Mar 13 – 14, 2023
UPC Campus Nord, Barcelona
CET timezone

For this course you will need to bring your own laptop.

All the PATC courses at BSC are free of charge.

Course Convener: Josep Gelpi, BSC Life Sciences - INB Computational Node 2 Group Manager

Objectives:  The course will make the attendants familiar with simulation technologies used in Life Sciences and their specific adaptation to HPC environment

Detailed outline:
Introduction to biomolecular simulation
Coarse-grained and atomistic simulation strategies
Automated setup for simulation

HPC specifics: Large scale parallelization, use of GPU’s
Storage and strategies for large scale trajectory analysis

Learning Outcomes: Setup, execute, and analyze standard simulations in HPC environment

Prerequisites: Basic knowledge of structural bioinformatics Basic knowledge of parallelization strategies. Material will be provided during the course, students are welcome to provide their own use cases.

UPC Campus Nord, Barcelona
C6 Building E101 room