PRACE code porting workshop in Linköping, Sweden

CET
Description

Welcome to NSC'09

13-14 October 2009

Linköping University, Campus Valla, Physics building, lecture hall Planck

PRACE Code Porting Workshop

SNIC Interaction

Topics:

  • presentation of PRACE prototype systems
  • examples of PRACE systems usage
  • demonstrations of code porting issues
  • user presentations
  • 20 years of Swedish HPC

Invited speakers

  • Ron Dror, D. E. Shaw Research, New York, USA
  • Jesus Labarta, Barcelona Supercomputing Centre, Barcelona, Spain
  • Michael Stephan, Research Centre Jülich, Jülich, Germany
  • Gabriele Carteni, Barcelona Supercomputing Centre, Barcelona, Spain
  • Tuesday, 13 October
    • 12:00 13:00
      Registration at the Physics building main entrance
    • 13:00 13:10
      Welcome and opening of the conference

      Bengt Persson, NSC

    • 13:10 13:30
      Swedish eInfrastructure for Research: The SNIC Landscape Document for 2010-2013

      Sverker Holmgren, SNIC

    • 13:30 14:00
      MariCel: the PRACE prototype at BSC

      Gabriele Carteni, Barcelona Supercomputing Centre, Spain

    • 14:00 14:30
      Prototype system at FZJ (MPP, IBM BlueGene /P)

      Michael Stephan, Research Centre Jülich, Germany (Cancelled)

    • 14:30 15:00
      Prototype system at PDC

      Daniel Ahlin, PDC

    • 15:00 15:25
      DEISA

      Erwin Laure, PDC

    • 15:25 15:40
      Coffee break 15m
    • 15:40 16:05
      Ab-initio studies of advanced multifunctional materials

      Biplab Sanyal, UPPMAX and Department of Physics and Materials Science, Uppsala University

    • 16:05 16:30
      Mesoscopic simulations of many-body protein interactions

      Mikael Lund, Kemicentrum, Lund University

    • 16:30 16:55
      Whole genome resequencing reveals loci under selection during chicken domestication

      Carl-Johan Rubin, Department of Medical Biochemistry and Microbiology, Uppsala University

    • 16:55 17:20
      Constructing error-correcting codes with huge distances

      Florian Hug, Lund University

    • 17:20 17:45
      The GIRD Grid Job Management Framework

      P-O Östberg, Department of Computing Science and HPC2N, Umeå University

  • Wednesday, 14 October
    • 09:00 09:50
      Performance Tuning for Anton, a Specialized Molecular Dynamics Machine

      Ron Dror, D.E. Shaw Research, New York, USA

    • 09:50 10:20
      High performance computing with GROMACS

      Berk Hess, Stockholm University

    • 10:20 10:40
      Coffee break 20m
    • 10:40 11:10
      Advanced profiling of GROMACS

      Jesus Labarta, Barcelona Supercomputing Centre, Spain

    • 11:10 12:10
      Visit to NSC computer hall
    • 12:10 13:00
      Lunch Break 50m
    • 13:00 13:30
      NSC during 20 years

      Karl-Fredrik Berggren, Department of Physics, Chemistry and Biology, Linköping University

    • 13:30 13:50
      Perspective on aircraft design and HPC development over 20 years

      Mattias Sillén, Saab Aerosystems, Linköping

    • 13:50 14:10
      History of the SMHI and NSC partnership

      Per Undén, SMHI

    • 14:10 14:30
      SUNET during 20 years

      Hans Wallberg, SUNET

    • 14:30 14:55
      HPC in Cardiovascular Medicine — the need for LES and FSI

      Matts Karlsson, Department of Management and Engineering, Linköping University

    • 14:55 15:20
      Shape optimization and active flow control for improved aerodynamic properties

      Sinisa Krajnovic, Division of Fluid Dynamics, Chalmers

    • 15:20 15:45
      Quantum Aspects of Surface Plasmons in Reduced Dimensions — insights from computational studies

      Shiwu Gao, Department of Physics, University of Gothenburg

    • 15:45 16:30
      Coffee and SNUG information 45m
    • 16:30 16:55
      Theory of simple and complex materials

      Sergei Simak, Department of Physics, Chemistry and Biology, Linköping University

    • 16:55 17:20
      Computational Combinatorics and Experimental Mathematics

      Klas Markström, Department of Mathematics and Mathematical Statistics, Umeå University

    • 17:20 17:45
      Laser-matter interactions and particle acceleration

      Mattias Marklund, Department of Physics, Umeå University

    • 17:45 18:10
      Numerical Simulation of Turbulent Boundary-Layer Flows

      Philipp Schlatter, Mechanics, KTH, Stockholm

    • 18:10 18:15
      Concluding remarks