Spring School in Computational Chemistry 2019 @ CSC

Europe/Helsinki
Training room Dogmi, 1st floor (CSC - IT Center for Science)

Training room Dogmi, 1st floor

CSC - IT Center for Science

Life Science Center, Keilaranta 14, Espoo, Finland
Description

Description

The Spring School provides a comprehensive, tutorial-style, hands-on, introductory and intermediate-level treatment to the essential ingredients for molecular modeling and computational chemistry using modern supercomputers. The School program is being prepared, but the main content will be similar to last years and consists of:

  • Classical molecular dynamics, intro + hands on (1 day)
  • Electronic structure theory, intro  + hands on (1 day)
  • Machine learning in chemistry, intro + hands on
  • Special topics: e.g. on Visualization, Enhanced Sampling Techniques, etc.

The school is a must for graduate students in the field, providing an overview on "what can be calculated and how should it be done", without forgetting the important aspect of network building.

Note: the School has been overbooked in one week after registration was opened. We are investigating the possibility to accommodate more participants, but it is likely that new registrations will go to waiting list.

Learning outcome

The learning outcome is to gain an overview of the two main methods in computational chemistry — molecular dynamics and electronic structure calculations — in connection with related HPC software packages and other useful skills in the trade. The workshop is also suited for an intensive crash course (the first two days) in computational modelling and is expected to be useful for students and researchers also in physics, materials sciences and biosciences. The following "Special topics" then build on this foundation.

Prerequisites

Working knowledge and some work experience from some branch of computational chemistry will be useful. Basic linux skills for hands-on exercises and elementary Python for Machine Learning hands-on. More detailed description of pre-requisites and links for self study.

Programme

The timetable can be seen on the left menu and materials accessed at the bottom of the page. For an overview of the event, read a summary blog of the 2019 School. In 2020 the School is likely organized in 10th - 13th March - stay tuned!

Software used in the School

See this link for for installations on your own laptop. The list below is for information.
 
For MD
 

Lecturers 

Language:  English
Price:         Free of charge

    • 09:00 09:30
      Welcome and Introduction Training room Dogmi, 1st floor

      Training room Dogmi, 1st floor

      CSC - IT Center for Science

      Dr. Atte Sillanpää

    • 09:30 10:00
      Introduction to Classical MD CSC's training room Dogmi ()

      CSC's training room Dogmi

      Lecturer: Dr. Luca Monticelli

    • 10:00 10:15
      Coffee break 15m CSC's training lobby

      CSC's training lobby

      CSC - IT Center for Science

      Life Science Center, Keilaranta 14, Espoo, Finland
    • 10:15 11:00
      Introduction to Classical MD: continued CSC's training room Dogmi ()

      CSC's training room Dogmi

      Lecturer: Dr. Luca Monticelli

    • 11:00 11:15
      Break 15m CSC's training lobby

      CSC's training lobby

      CSC - IT Center for Science

      Life Science Center, Keilaranta 14, Espoo, Finland
    • 11:15 12:00
      Introduction to Classical MD: continued CSC's training room Dogmi ()

      CSC's training room Dogmi

      Lecturer: Dr. Luca Monticelli

    • 12:00 13:00
      Lunch 1h Restaurant, Life Science Center Keilaniemi

      Restaurant, Life Science Center Keilaniemi

      CSC - IT Center for Science

      Life Science Center, Keilaranta 14, Espoo, Finland
    • 13:00 13:15
      Using CSC's environment - Pitching each tutorial CSC's training room Dogmi ()

      CSC's training room Dogmi

      Lecturer: Dr. Atte Sillanpää

    • 13:15 14:30
      MD workshop (advanced) TBA ()

      TBA

      Lecturer: Dr. Martti Louhivuori

    • 13:15 14:30
      MD workshop (basics) TBA ()

      TBA

      Lecturer: Dr. Atte Sillanpää

    • 13:15 14:30
      MD workshop (intermediate) TBA ()

      TBA

      Lecturer: Dr. Luca Monticelli

    • 14:30 15:00
      Coffee break 30m CSC's training lobby

      CSC's training lobby

      CSC - IT Center for Science

      Life Science Center, Keilaranta 14, Espoo, Finland
    • 15:00 16:30
      MD workshop (advanced) TBA ()

      TBA

      Lecturer: Dr. Martti Louhivuori

    • 15:00 16:30
      MD workshop (intermediate) TBA ()

      TBA

      Lecturer: Dr. Luca Monticelli

    • 15:00 16:30
      MD-workshop (basics) TBA ()

      TBA

      Lecturer: Dr. Atte Sillanpää

    • 16:30 17:00
      Break 30m Training room Dogmi, 1st floor

      Training room Dogmi, 1st floor

      CSC - IT Center for Science

      Life Science Center, Keilaranta 14, Espoo, Finland
    • 17:00 19:00
      Flash talks: Each participant presents his/her research in three minutes CSC's training lobby ()

      CSC's training lobby

    • 09:00 10:00
      Introduction to electronic-structure theory CSC's training room Dogmi ()

      CSC's training room Dogmi

      Lecturer: Dr. Mikael Johansson

    • 10:00 10:15
      Coffee break 15m CSC's training lobby

      CSC's training lobby

      CSC - IT Center for Science

    • 10:15 11:00
      Introduction to electronic-structure theory: continued CSC's training room Dogmi ()

      CSC's training room Dogmi

      Lecturer: Dr. Mikael Johansson

    • 11:00 11:15
      Break 15m CSC's training lobby

      CSC's training lobby

      CSC - IT Center for Science

      Life Science Center, Keilaranta 14, Espoo, Finland
    • 11:15 12:00
      Introduction to electronic-structure theory: continued CSC's training room Dogmi ()

      CSC's training room Dogmi

      Lecturer: Dr. Mikael Johansson

    • 12:00 13:00
      Lunch 1h Restaurant, Life Science Center Keilaniemi

      Restaurant, Life Science Center Keilaniemi

      CSC - IT Center for Science

      Life Science Center, Keilaranta 14, Espoo, Finland
    • 13:00 13:10
      Using CSC's environment - Pitching each tutorial Training room Dogmi, 1st floor

      Training room Dogmi, 1st floor

      CSC - IT Center for Science

      Life Science Center, Keilaranta 14, Espoo, Finland

      Lecturer: Dr. Atte Sillanpää

    • 13:10 14:30
      QC workshop (advanced) TBA ()

      TBA

      Life Science Center, Keilaranta 14, Espoo, Finland

      Lecturer: Dr. Mikael Johansson

    • 13:10 14:30
      QC workshop (basics) TBA ()

      TBA

      Life Science Center, Keilaranta 14, Espoo, Finland

      Lecturer: Dr. Michael Patzschke

    • 13:10 14:30
      QC workshop (intermediate) TBA ()

      TBA

      Life Science Center, Keilaranta 14, Espoo, Finland

      Lecturer: Dr. Nino Runeberg

    • 14:30 15:00
      Coffee break 30m CSC's training lobby

      CSC's training lobby

      CSC - IT Center for Science

      Life Science Center, Keilaranta 14, Espoo, Finland
    • 15:00 16:45
      QC workshop (advanced) TBA ()

      TBA

      Lecturer: Dr. Mikael Johansson

    • 15:00 16:45
      QC workshop (basics) TBA ()

      TBA

      Lecturer: Dr. Michael Patzschke

    • 15:00 16:45
      QC workshop (intermediate) TBA ()

      TBA

      Lecturer: Dr. Nino Runeberg

    • 16:45 18:00
      Flash talks: continued Training room Dogmi, 1st floor

      Training room Dogmi, 1st floor

      CSC - IT Center for Science

      Life Science Center, Keilaranta 14, Espoo, Finland
    • 09:00 10:00
      Machine Learning in Chemistry CSC's training room Dogmi ()

      CSC's training room Dogmi

      Lecturers: Dr. Filippo Federici Canova

    • 10:00 10:15
      Coffee break 15m CSC's training lobby

      CSC's training lobby

      CSC - IT Center for Science

      Life Science Center, Keilaranta 14, Espoo, Finland
    • 10:15 11:00
      Machine Learning in Chemistry: continued CSC's training room Dogmi ()

      CSC's training room Dogmi

      Lecturers: Dr. Filippo Federici Canova, Yashasvi Ranawat

    • 11:00 11:15
      Break 15m CSC's training lobby

      CSC's training lobby

      CSC - IT Center for Science

      Life Science Center, Keilaranta 14, Espoo, Finland
    • 11:15 12:00
      Machine Learning in Chemistry: continued CSC's training room Dogmi ()

      CSC's training room Dogmi

      Lecturers: Dr. Filippo Federici Canova, Yashasvi Ranawat

    • 12:00 13:00
      Lunch 1h Restaurant, Life Science Center Keilaniemi

      Restaurant, Life Science Center Keilaniemi

      CSC - IT Center for Science

      Life Science Center, Keilaranta 14, Espoo, Finland
    • 13:00 13:45
      Machine Learning in Chemistry: Machine Learning in Chemistry: continued Training room Dogmi, 1st floor

      Training room Dogmi, 1st floor

      CSC - IT Center for Science

      Life Science Center, Keilaranta 14, Espoo, Finland

      Lecturers: Dr. Filippo Federici Canova, Yashasvi Ranawat

    • 13:45 14:00
      Break 15m CSC's training lobby

      CSC's training lobby

      CSC - IT Center for Science

      Life Science Center, Keilaranta 14, Espoo, Finland
    • 14:00 15:00
      Workflows and data management: TBD Training room Dogmi, 1st floor

      Training room Dogmi, 1st floor

      CSC - IT Center for Science

      Life Science Center, Keilaranta 14, Espoo, Finland

      Lecturer: Marc Jäger

    • 15:00 15:15
      Coffee break 15m Training room Dogmi, 1st floor

      Training room Dogmi, 1st floor

      CSC - IT Center for Science

      Life Science Center, Keilaranta 14, Espoo, Finland
    • 15:15 16:30
      Workflows and data management: TBD Training room Dogmi, 1st floor

      Training room Dogmi, 1st floor

      CSC - IT Center for Science

      Lecturer: Marc Jäger

    • 16:30 17:00
      Break and transition 30m Training room Dogmi, 1st floor

      Training room Dogmi, 1st floor

      CSC - IT Center for Science

      Life Science Center, Keilaranta 14, Espoo, Finland

      Transition from training room Dogmi to A-building premises

    • 17:00 17:45
      Human vs. Machine

      Lecturer: Prof. Patrick Rinke

    • 17:45 21:00
      Sauna evening & dinner 3h 15m Life Science Center Keilaniemi, A-building, sauna

      Life Science Center Keilaniemi, A-building, sauna

      CSC - IT Center for Science

      Life Science Center, Keilaranta 14, Espoo, Finland
    • 09:00 10:00
      Parallel Track 1: Enhanced Sampling Techniques CSC, 1st floor, room Debatti ()

      CSC, 1st floor, room Debatti

    • 09:00 10:00
      Parallel Track 2: Wavefunction Analysis CSC's training room Dogmi ()

      CSC's training room Dogmi

      Lecturer: Prof. Ville Kaila

    • 10:00 10:15
      Coffee break 15m CSC's training lobby

      CSC's training lobby

      CSC - IT Center for Science

      Life Science Center, Keilaranta 14, Espoo, Finland
    • 10:15 11:00
      Parallel Track 1: Jupyter Notebooks for visualization and analysis CSC, 1st floor, room Debatti

      CSC, 1st floor, room Debatti

      CSC - IT Center for Science

      Life Science Center, Keilaranta 14, Espoo, Finland
    • 10:15 11:00
      Parallel Track 2: Visualization with VMD hands-on CSC's training room Dogmi ()

      CSC's training room Dogmi

      Lecturer: Prof. Ville Kaila

    • 11:00 11:15
      Break 15m CSC's training lobby

      CSC's training lobby

      CSC - IT Center for Science

      Life Science Center, Keilaranta 14, Espoo, Finland
    • 11:15 12:00
      Parallel Track 1: Jupyter Notebooks for visualization and analysis: continued CSC, 1st floor, room Debatti

      CSC, 1st floor, room Debatti

      CSC - IT Center for Science

      Life Science Center, Keilaranta 14, Espoo, Finland
    • 11:15 12:00
      Parallel Track 2: Visualization with VMD hands-on CSC's training room Dogmi ()

      CSC's training room Dogmi

      Lecturer: Prof. Ville Kaila

    • 12:00 13:00
      Lunch 1h Restaurant, Life Science Center Keilaniemi

      Restaurant, Life Science Center Keilaniemi

      CSC - IT Center for Science

      Life Science Center, Keilaranta 14, Espoo, Finland
    • 13:00 13:20
      HPC-Europa3 CSC's training room Dogmi ()

      CSC's training room Dogmi

      Dr. Atte Sillanpää

    • 13:20 14:00
      Free discussion with lecturers Training room Dogmi, 1st floor

      Training room Dogmi, 1st floor

      CSC - IT Center for Science

      Life Science Center, Keilaranta 14, Espoo, Finland
Your browser is out of date!

Update your browser to view this website correctly. Update my browser now

×