PRACE/BioExcel Seasonal School 2019, Sweden - HPC for Life Sciences

from Monday, 10 June 2019 (08:45) to Thursday, 13 June 2019 (17:00)
Stockholm, Sweden (V37)

        : Sessions
    /     : Talks
        : Breaks
10 Jun 2019
11 Jun 2019
12 Jun 2019
13 Jun 2019
AM
08:45
Registration (until 09:20) (V37)
09:20
Welcome - Lilit Axner (KTH-PDC-HPCV) (until 09:40) (V37)
09:40
Introduction to BioExcel Centre of Excellence -Dr Rossen Apostolov (KTH) (until 10:00) (V37)
10:00 --- Coffee break ---
10:30
Lecture on Molecular Visualizations with VMD -Mr John Stone (University of Illinois, Urbana-Champaign) (until 12:00) (V37)
09:30
Lecture on HPC simulations with NAMD -Dr Joao Rui Vieira Ribeiro (University of Illinois) (until 10:30) (V37)
10:30 --- Coffee break ---
11:00
Lecture on HPC simulations with NAMD -Dr Joao Rui Vieira Ribeiro (University of Illinois) (until 12:00) (V37)
09:30
Lecture on HPC simulations with GROMACS -Prof. Erik Lindahl (Stockholm University) (until 10:30) (V37)
10:30 --- Coffee break ---
11:00
Lecture on HPC simulations with GROMACS -Prof. Erik Lindahl (Stockholm University) (until 12:00) (V37)
09:30
Lecture on HPC simulations with AMBER -Prof. Thomas Cheatham (University Information Technology, University of Utah) (until 10:30) (V37)
10:30 --- Coffee break ---
11:00
Lecture on HPC simulations with AMBER -Prof. Thomas Cheatham (University Information Technology, University of Utah) (until 12:00) (V37)
PM
12:00 --- Lunch ---
13:00
Introduction on how to use PDC supercomputing system -Dr Henric Zazzi (until 13:45) (V37)
13:45
Hands-on: VMD (until 15:00) (Room 343)
15:00 --- Coffee Break ---
15:30
Hands-on: VMD (until 17:00) (Room 343)
17:30 Welcome dinner   ()
12:00 --- Lunch ---
13:00
Hands-on: NAMD (until 14:30) (Room 343)
14:30 --- Coffee break ---
15:00
Hands-on: NAMD (until 17:00) (Room 343)
12:00 --- Lunch ---
13:00
Hands-on: GROMACS (until 14:30) (Room 343)
14:30 --- Coffee break ---
15:00
Hands-on: GROMACS (until 17:00) (Room 343)
17:30
Social Event (until 19:30) ()
12:00 --- Lunch ---
13:00
Hands-on: AMBER (until 14:30) (Room 343)
14:30 --- Coffee break ---
15:00
Hands-on: AMBER (until 17:00) (Room 343)